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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
THCA rs905834 chr5:59113301 A/G MTA3 chr2:42721709-42984087:+ -0.29 -5.95 5.28E-9 Box Plot
THCA rs910370 chr14:39911085 C/T LOC647288 chr13:75811890-75814517:- -0.48 -8.72 4.49E-17 Box Plot
THCA rs910371 chr14:39911169 A/C LOC647288 chr13:75811890-75814517:- 0.48 8.74 3.97E-17 Box Plot
THCA rs910620 chr20:1425078 C/T FKBP1AP1 chr19:58337829-58338146:- -0.41 -6.94 1.31E-11 Box Plot
THCA rs912111 chr20:1312910 A/G FKBP1AP1 chr19:58337829-58338146:- 0.41 7.45 4.52E-13 Box Plot
THCA rs912112 chr20:1342026 C/T FKBP1AP1 chr19:58337829-58338146:- 0.39 6.46 2.6E-10 Box Plot
THCA rs9135 chr17:3763933 A/G MRPL33 chr2:27994584-28210954:+ 0.24 6.07 2.6E-9 Box Plot
THCA rs915272 chr10:120892542 T/C FAM45B chrX:129628939-129630562:+ 0.2 5.98 4.34E-9 Box Plot
THCA rs9162 chr2:132291170 A/G CCDC74B chr2:130896860-130902707:- 0.38 6.56 1.41E-10 Box Plot
THCA rs918506 chr5:169661414 C/A ITGB1BP2 chrX:70521584-70525221:+ -0.28 -6.1 2.2E-9 Box Plot
THCA rs920014 chr14:66704482 G/C ATP6V1D chr14:67761088-67826982:- 0.42 7.44 4.65E-13 Box Plot
THCA rs920044 chr8:11224313 C/T SGK223 chr8:8175258-8244008:- -0.38 -7.13 3.64E-12 Box Plot
THCA rs920047 chr8:11087475 C/T SGK223 chr8:8175258-8244008:- 0.48 9.29 5.27E-19 Box Plot
THCA rs9205 chr8:11689119 G/C SGK223 chr8:8175258-8244008:- -0.44 -7.54 2.4E-13 Box Plot
THCA rs921865 chr17:18224195 G/A LOC162632 chr17:16614993-16707819:+ 0.37 6.04 3.1E-9 Box Plot